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PLD4 phospholipase D family member 4 [ Neogale vison (American mink) ]

Gene ID: 122894071, updated on 22-Mar-2024

Summary

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Gene symbol
PLD4
Gene description
phospholipase D family member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Orthologs
human mouse all
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Genomic context

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See PLD4 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 13 NC_058103.1 (1630077..1637857, complement)

Chromosome 13 - NC_058103.1Genomic Context describing neighboring genes Neighboring gene clathrin binding box of aftiphilin containing 1 Neighboring gene AHNAK nucleoprotein 2 Neighboring gene centrosomal protein 170B Neighboring gene zinc finger and BTB domain containing 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058103.1 Chromosome 13 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exonuclease PLD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058103.1 Reference ASM_NN_V1 Primary Assembly

    Range
    1630077..1637857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044231410.1 → XP_044087345.1  5'-3' exonuclease PLD4

    Conserved Domains (2) summary
    PHA02820
    Location:206 → 605
    PHA02820; phospholipase-D-like protein; Provisional
    cl15239
    Location:418 → 605
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
Nucleotide Protein
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