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RAB3IP RAB3A interacting protein [ Neogale vison (American mink) ]

Gene ID: 122892615, updated on 22-Mar-2024

Summary

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Gene symbol
RAB3IP
Gene description
RAB3A interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Also known as
RAB3I
Orthologs
human mouse all
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Genomic context

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See RAB3IP in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 12 NC_058102.1 (47591012..47636658, complement)

Chromosome 12 - NC_058102.1Genomic Context describing neighboring genes Neighboring gene myelin regulatory factor like Neighboring gene myelin regulatory factor-like protein Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC122892618 Neighboring gene uncharacterized LOC122892617 Neighboring gene uncharacterized LOC122892620

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058102.1 Chromosome 12 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi to plasma membrane transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab-3A-interacting protein
Names
Rab-3A-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058102.1 Reference ASM_NN_V1 Primary Assembly

    Range
    47591012..47636658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044229327.1 → XP_044085262.1  rab-3A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C7B1T8
    Conserved Domains (3) summary
    COG4372
    Location:104 → 240
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:173 → 241
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:266 → 458
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  2. XM_044229332.1 → XP_044085267.1  rab-3A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C7B1T8
    Conserved Domains (3) summary
    COG4372
    Location:104 → 240
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:173 → 241
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:266 → 458
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  3. XM_044229330.1 → XP_044085265.1  rab-3A-interacting protein isoform X3

    UniProtKB/TrEMBL
    A0A8C7B1T8, A0A8C7B4M3
    Conserved Domains (3) summary
    COG4372
    Location:116 → 252
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:185 → 253
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:278 → 470
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  4. XM_044229329.1 → XP_044085264.1  rab-3A-interacting protein isoform X3

    UniProtKB/TrEMBL
    A0A8C7B1T8, A0A8C7B4M3
    Conserved Domains (3) summary
    COG4372
    Location:116 → 252
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:185 → 253
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:278 → 470
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  5. XM_044229333.1 → XP_044085268.1  rab-3A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C7B1T8
    Conserved Domains (3) summary
    COG4372
    Location:104 → 240
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:173 → 241
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:266 → 458
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)

  6. XM_044229328.1 → XP_044085263.1  rab-3A-interacting protein isoform X2

    UniProtKB/TrEMBL
    A0A8C7B1T8
    Conserved Domains (3) summary
    COG4372
    Location:120 → 256
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06428
    Location:189 → 257
    Sec2p; GDP/GTP exchange factor Sec2p
    cd21068
    Location:282 → 474
    Rab11BD_RAB3IP; Rab11 binding domain of Rab-3A-interacting protein (RAB3IP)
Nucleotide Protein
Heading Accession and Version

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