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TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [ Neogale vison (American mink) ]

Gene ID: 122891933, updated on 22-Mar-2024

Summary

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Gene symbol
TAB1
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Orthologs
human mouse all
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Genomic context

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See TAB1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 12 NC_058102.1 (9061665..9096827, complement)

Chromosome 12 - NC_058102.1Genomic Context describing neighboring genes Neighboring gene MIEF1 upstream open reading frame protein Neighboring gene mitochondrial elongation factor 1 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene U1 spliceosomal RNA Neighboring gene synaptogyrin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058102.1 Chromosome 12 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058102.1 Reference ASM_NN_V1 Primary Assembly

    Range
    9061665..9096827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044227985.1 → XP_044083920.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C7A8N4, U6D0Q9
    Conserved Domains (1) summary
    cd00143
    Location:35 → 339
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_044227984.1 → XP_044083919.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    U6D0Q9
    Conserved Domains (1) summary
    cd00143
    Location:48 → 352
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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