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ripk1l receptor (TNFRSF)-interacting serine-threonine kinase 1, like [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122887413, updated on 22-Mar-2024

Summary

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Gene symbol
ripk1l
Gene description
receptor (TNFRSF)-interacting serine-threonine kinase 1, like
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
human zebrafish all
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Genomic context

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See ripk1l in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG13 NC_058054.1 (13414617..13422440)

Linkage Group LG13 - NC_058054.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 4a Neighboring gene dual specificity phosphatase 22b Neighboring gene opsin 7, group member a Neighboring gene meprin A subunit beta b Neighboring gene PH domain and leucine rich repeat protein phosphatase 1 Neighboring gene phosphatase and actin regulator 1-like Neighboring gene zinc finger protein 665-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058054.1 Chromosome LG13 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables JUN kinase kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-interacting serine/threonine-protein kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058054.1 Reference ASM2008510v1 Primary Assembly

    Range
    13414617..13422440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044220602.1 → XP_044076537.1  receptor-interacting serine/threonine-protein kinase 1

    Conserved Domains (2) summary
    cl14633
    Location:590 → 673
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl21453
    Location:22 → 289
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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