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ndst1a N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122880367, updated on 22-Mar-2024

Summary

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Gene symbol
ndst1a
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
17
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG8 NC_058049.1 (17069037..17111913, complement)

Linkage Group LG8 - NC_058049.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 2 Neighboring gene CD74 molecule, major histocompatibility complex, class II invariant chain a Neighboring gene myozenin-2 Neighboring gene RNA binding motif protein 22 Neighboring gene soluble guanylate cyclase 88E-like Neighboring gene uncharacterized LOC122880378

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058049.1 Chromosome LG8 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058049.1 Reference ASM2008510v1 Primary Assembly

    Range
    17069037..17111913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044205406.1 → XP_044061341.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

  2. XM_044205403.1 → XP_044061338.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  3. XM_044205405.1 → XP_044061340.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  4. XM_044205404.1 → XP_044061339.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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