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LOC122872230 cobalamin trafficking protein CblD-like [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122872230, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122872230
Gene description
cobalamin trafficking protein CblD-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
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Genomic context

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See LOC122872230 in Genome Data Viewer
Location:
chromosome: LG24
Exon count:
8
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG24 NC_058065.1 (13419801..13424057)

Linkage Group LG24 - NC_058065.1Genomic Context describing neighboring genes Neighboring gene Rho family GTPase 3a Neighboring gene uncharacterized LOC122872225 Neighboring gene uncharacterized LOC122872228 Neighboring gene ly6/PLAUR domain-containing protein 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058065.1 Chromosome LG24 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058065.1 Reference ASM2008510v1 Primary Assembly

    Range
    13419801..13424057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044188164.1 → XP_044044099.1  cobalamin trafficking protein CblD-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases