U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122867775, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
ikbke
Gene description
inhibitor of nuclear factor kappa B kinase subunit epsilon
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ikbke in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
21
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG2 NC_058043.1 (20773158..20787350, complement)

Linkage Group LG2 - NC_058043.1Genomic Context describing neighboring genes Neighboring gene dual specificity tyrosine phosphorylation regulated kinase 3 Neighboring gene Ras association domain family member 5 Neighboring gene SLIT-ROBO Rho GTPase activating protein 2 Neighboring gene family with sequence similarity 72 member A

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058043.1 Chromosome LG2 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inhibitor of nuclear factor kappa-B kinase subunit epsilon

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058043.1 Reference ASM2008510v1 Primary Assembly

    Range
    20773158..20787350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044178987.1 → XP_044034922.1  inhibitor of nuclear factor kappa-B kinase subunit epsilon

    Conserved Domains (2) summary
    cl21453
    Location:19 → 333
    PKc_like; Protein Kinases, catalytic domain
    cl28922
    Location:311 → 386
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_044178977.1 → XP_044034912.1  inhibitor of nuclear factor kappa-B kinase subunit epsilon

    Conserved Domains (2) summary
    cl21453
    Location:19 → 333
    PKc_like; Protein Kinases, catalytic domain
    cl28922
    Location:311 → 386
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.