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unm_hu7910 un-named hu7910 [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122866446, updated on 22-Mar-2024

Summary

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Gene symbol
unm_hu7910
Gene description
un-named hu7910
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
zebrafish all
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Genomic context

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See unm_hu7910 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
34
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG19 NC_058060.1 (24664987..24712691)

Linkage Group LG19 - NC_058060.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122866444 Neighboring gene sodium channel protein type 4 subunit alpha-like Neighboring gene uncharacterized LOC122866445 Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene clavesin-1-like Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene RIO kinase 3 (yeast)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058060.1 Chromosome LG19 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase; calponin homology domain-containing protein DDB_G0272472

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058060.1 Reference ASM2008510v1 Primary Assembly

    Range
    24664987..24712691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044176110.1 → XP_044032045.1  calponin homology domain-containing protein DDB_G0272472 isoform X14

    Conserved Domains (2) summary
    PTZ00121
    Location:196 → 735
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:43 → 322
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  2. XM_044176111.1 → XP_044032046.1  calponin homology domain-containing protein DDB_G0272472 isoform X15

    Conserved Domains (2) summary
    PTZ00121
    Location:195 → 734
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:42 → 321
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  3. XM_044176115.1 → XP_044032050.1  aspartyl/asparaginyl beta-hydroxylase isoform X18

    Conserved Domains (4) summary
    pfam05279
    Location:43 → 246
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:281 → 464
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:365 → 391
    TPR; TPR repeat [structural motif]
    cl40423
    Location:531 → 688
    cupin_RmlC-like; RmlC-like cupin superfamily

  4. XM_044176112.1 → XP_044032047.1  aspartyl/asparaginyl beta-hydroxylase isoform X16

    Conserved Domains (4) summary
    pfam05279
    Location:43 → 254
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:305 → 488
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:389 → 415
    TPR; TPR repeat [structural motif]
    cl40423
    Location:555 → 712
    cupin_RmlC-like; RmlC-like cupin superfamily

  5. XM_044176097.1 → XP_044032032.1  calponin homology domain-containing protein DDB_G0272472 isoform X2

    Conserved Domains (2) summary
    PTZ00121
    Location:260 → 799
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:107 → 386
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  6. XM_044176096.1 → XP_044032031.1  calponin homology domain-containing protein DDB_G0272472 isoform X1

    Conserved Domains (2) summary
    PTZ00121
    Location:261 → 800
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:108 → 387
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  7. XM_044176099.1 → XP_044032034.1  calponin homology domain-containing protein DDB_G0272472 isoform X4

    Conserved Domains (2) summary
    PTZ00121
    Location:246 → 785
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:108 → 372
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  8. XM_044176100.1 → XP_044032035.1  calponin homology domain-containing protein DDB_G0272472 isoform X5

    Conserved Domains (2) summary
    PTZ00121
    Location:245 → 784
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:108 → 371
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  9. XM_044176105.1 → XP_044032040.1  calponin homology domain-containing protein DDB_G0272472 isoform X10

    Conserved Domains (2) summary
    PTZ00121
    Location:230 → 769
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:108 → 356
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  10. XM_044176102.1 → XP_044032037.1  calponin homology domain-containing protein DDB_G0272472 isoform X7

    Conserved Domains (2) summary
    PTZ00121
    Location:238 → 777
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:85 → 364
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  11. XM_044176098.1 → XP_044032033.1  calponin homology domain-containing protein DDB_G0272472 isoform X3

    Conserved Domains (2) summary
    PTZ00121
    Location:246 → 785
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:108 → 372
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  12. XM_044176108.1 → XP_044032043.1  aspartyl/asparaginyl beta-hydroxylase isoform X12

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 339
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:369 → 552
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:453 → 479
    TPR; TPR repeat [structural motif]
    cl40423
    Location:619 → 776
    cupin_RmlC-like; RmlC-like cupin superfamily

  13. XM_044176104.1 → XP_044032039.1  aspartyl/asparaginyl beta-hydroxylase isoform X9

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 343
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:373 → 556
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:457 → 483
    TPR; TPR repeat [structural motif]
    cl40423
    Location:623 → 780
    cupin_RmlC-like; RmlC-like cupin superfamily

  14. XM_044176101.1 → XP_044032036.1  aspartyl/asparaginyl beta-hydroxylase isoform X6

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 334
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:385 → 568
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:469 → 495
    TPR; TPR repeat [structural motif]
    cl40423
    Location:635 → 792
    cupin_RmlC-like; RmlC-like cupin superfamily

  15. XM_044176109.1 → XP_044032044.1  aspartyl/asparaginyl beta-hydroxylase isoform X13

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 326
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:361 → 544
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:445 → 471
    TPR; TPR repeat [structural motif]
    cl40423
    Location:611 → 768
    cupin_RmlC-like; RmlC-like cupin superfamily

  16. XM_044176103.1 → XP_044032038.1  aspartyl/asparaginyl beta-hydroxylase isoform X8

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 343
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:373 → 556
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:457 → 483
    TPR; TPR repeat [structural motif]
    cl40423
    Location:623 → 780
    cupin_RmlC-like; RmlC-like cupin superfamily

  17. XM_044176107.1 → XP_044032042.1  aspartyl/asparaginyl beta-hydroxylase isoform X11

    Conserved Domains (4) summary
    pfam05279
    Location:108 → 319
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    TIGR02917
    Location:370 → 553
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:454 → 480
    TPR; TPR repeat [structural motif]
    cl40423
    Location:620 → 777
    cupin_RmlC-like; RmlC-like cupin superfamily

  18. XM_044176113.1 → XP_044032048.1  calponin homology domain-containing protein DDB_G0272472 isoform X17

    Conserved Domains (2) summary
    PTZ00121
    Location:150 → 689
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:2 → 276
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

  19. XM_044176114.1 → XP_044032049.1  calponin homology domain-containing protein DDB_G0272472 isoform X17

    Conserved Domains (2) summary
    PTZ00121
    Location:150 → 689
    PTZ00121; MAEBL; Provisional
    pfam05279
    Location:2 → 276
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
Nucleotide Protein
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