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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122862380, updated on 22-Mar-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
24
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG1 NC_058042.1 (31624209..31705911, complement)

Linkage Group LG1 - NC_058042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122870701 Neighboring gene MTSS I-BAR domain containing 2b Neighboring gene neural-cadherin Neighboring gene uncharacterized LOC122862827 Neighboring gene uncharacterized LOC122875205 Neighboring gene zinc finger protein 507

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058042.1 Chromosome LG1 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058042.1 Reference ASM2008510v1 Primary Assembly

    Range
    31624209..31705911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044168036.1 → XP_044023971.1  probable C-mannosyltransferase DPY19L3 isoform X3

  2. XM_044168125.1 → XP_044024060.1  probable C-mannosyltransferase DPY19L3 isoform X4

  3. XM_044168024.1 → XP_044023959.1  probable C-mannosyltransferase DPY19L3 isoform X3

  4. XM_044168214.1 → XP_044024149.1  probable C-mannosyltransferase DPY19L3 isoform X5

  5. XM_044167956.1 → XP_044023891.1  probable C-mannosyltransferase DPY19L3 isoform X2

  6. XM_044167868.1 → XP_044023803.1  probable C-mannosyltransferase DPY19L3 isoform X1

  7. XM_044168384.1 → XP_044024319.1  probable C-mannosyltransferase DPY19L3 isoform X7

  8. XM_044168299.1 → XP_044024234.1  probable C-mannosyltransferase DPY19L3 isoform X6

  9. XM_044168469.1 → XP_044024404.1  probable C-mannosyltransferase DPY19L3 isoform X8

Nucleotide Protein
Heading Accession and Version

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