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Lpin phosphatidate phosphatase LPIN [ Aphidius gifuensis ]

Gene ID: 122860762, updated on 10-Oct-2024

Summary

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Gene symbol
Lpin
Gene description
phosphatidate phosphatase LPIN
Locus tag
HCN44_002369
See related
EnsemblRapid:LOC122860762
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
Orthologs
fruit fly honey bee all
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Genomic context

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See Lpin in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
9
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG1 NC_057788.1 (1244823..1254323, complement)

Linkage Group LG1 - NC_057788.1Genomic Context describing neighboring genes Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta Neighboring gene ribosomal protein LP0-like Neighboring gene uncharacterized LOC122860765 Neighboring gene uncharacterized LOC122860764 Neighboring gene uncharacterized LOC122860766

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057788.1 Chromosome LG1 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1; phosphatidate phosphatase LPIN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057788.1 Reference ASM1490517v1 Primary Assembly

    Range
    1244823..1254323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044164726.1 → XP_044020661.1  phosphatidate phosphatase LPIN3 isoform X2

    Related
    XP_044020661.1, XM_044164726.1
    Conserved Domains (2) summary
    smart00775
    Location:911 → 1067
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:4 → 111
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  2. XM_044164728.1 → XP_044020663.1  phosphatidate phosphatase LPIN1 isoform X4

    Related
    XP_044020663.1, XM_044164728.1
    Conserved Domains (2) summary
    smart00775
    Location:856 → 1012
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:4 → 111
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  3. XM_044164725.1 → XP_044020660.1  phosphatidate phosphatase LPIN3 isoform X1

    UniProtKB/TrEMBL
    A0A835CWT8
    Related
    XP_044020660.1, XM_044164725.1
    Conserved Domains (3) summary
    pfam04571
    Location:4 → 110
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:868 → 1093
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:634 → 712
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_044164729.1 → XP_044020664.1  phosphatidate phosphatase LPIN1 isoform X5

    Related
    XP_044020664.1, XM_044164729.1
    Conserved Domains (2) summary
    smart00775
    Location:856 → 1012
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:4 → 111
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  5. XM_044164727.1 → XP_044020662.1  phosphatidate phosphatase LPIN1 isoform X3

    Related
    XP_044020662.1, XM_044164727.1
    Conserved Domains (2) summary
    smart00775
    Location:916 → 1072
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:4 → 111
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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