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LOC122856266 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Aphidius gifuensis ]

Gene ID: 122856266, updated on 14-Nov-2024

Summary

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Gene symbol
LOC122856266
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
Locus tag
HCN44_007358
See related
EnsemblRapid:LOC122856266
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
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Genomic context

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See LOC122856266 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
5
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG5 NC_057792.1 (5411170..5412830)

Linkage Group LG5 - NC_057792.1Genomic Context describing neighboring genes Neighboring gene lysophospholipase D GDPD1-like Neighboring gene uncharacterized LOC122857200 Neighboring gene protein max-like Neighboring gene mago, exon junction complex subunit Neighboring gene transmembrane protease serine 5-like Neighboring gene Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 Neighboring gene mediator complex subunit skuld

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057792.1 Chromosome LG5 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in core 1 O-glycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057792.1 Reference ASM1490517v1 Primary Assembly

    Range
    5411170..5412830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044157961.1 → XP_044013896.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A834XMI1
    Related
    XP_044013896.1, XM_044157961.1
    Conserved Domains (1) summary
    cl21608
    Location:101 → 247
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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