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Tmtc2 Transmembrane O-mannosyltransferase targeting cadherins 2 [ Aphidius gifuensis ]

Gene ID: 122855259, updated on 10-Oct-2024

Summary

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Gene symbol
Tmtc2
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 2
Locus tag
HCN44_000172
See related
EnsemblRapid:LOC122855259
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
Orthologs
fruit fly honey bee all
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Genomic context

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See Tmtc2 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
10
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG4 NC_057791.1 (16136386..16142361, complement)

Linkage Group LG4 - NC_057791.1Genomic Context describing neighboring genes Neighboring gene wing blister Neighboring gene band 7 protein AGAP004871 Neighboring gene signal recognition particle receptor beta Neighboring gene probable dimethyladenosine transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057791.1 Chromosome LG4 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057791.1 Reference ASM1490517v1 Primary Assembly

    Range
    16136386..16142361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044156482.1 → XP_044012417.1  protein O-mannosyl-transferase TMTC2-like

    UniProtKB/TrEMBL
    A0A834XRI8
    Related
    XP_044012417.1, XM_044156482.1
    Conserved Domains (3) summary
    TIGR02917
    Location:471 → 834
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:504 → 532
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:240 → 313
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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