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Pgant6 Polypeptide N-Acetylgalactosaminyltransferase 6 [ Aphidius gifuensis ]

Gene ID: 122854475, updated on 1-Oct-2024

Summary

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Gene symbol
Pgant6
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 6
See related
EnsemblRapid:LOC122854475
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
Orthologs
honey bee all
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Genomic context

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See Pgant6 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
2
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG1 NC_057788.1 (23619456..23622787)

Linkage Group LG1 - NC_057788.1Genomic Context describing neighboring genes Neighboring gene mustard Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene Katanin 60 Neighboring gene Hydroxyacid oxidase Neighboring gene uncharacterized LOC122860834 Neighboring gene ubiquitin carboxyl-terminal hydrolase-like faf

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057788.1 Chromosome LG1 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057788.1 Reference ASM1490517v1 Primary Assembly

    Range
    23619456..23622787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044155196.1 → XP_044011131.1  N-acetylgalactosaminyltransferase 6

    Related
    XP_044011131.1, XM_044155196.1
    Conserved Domains (2) summary
    cd02510
    Location:142 → 437
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:455 → 581
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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