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LOC122852895 lactosylceramide 4-alpha-galactosyltransferase-like [ Aphidius gifuensis ]

Gene ID: 122852895, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122852895
Gene description
lactosylceramide 4-alpha-galactosyltransferase-like
Locus tag
HCN44_005837
See related
EnsemblRapid:LOC122852895
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
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Genomic context

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See LOC122852895 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
4
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG3 NC_057790.1 (22210047..22212080)

Linkage Group LG3 - NC_057790.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 5-like Neighboring gene uncharacterized LOC122852894 Neighboring gene beta-1,3-galactosyltransferase 1-like Neighboring gene beta-1,4-N-acetylgalactosaminyltransferase bre-4 Neighboring gene 5-aminolevulinate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057790.1 Chromosome LG3 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057790.1 Reference ASM1490517v1 Primary Assembly

    Range
    22210047..22212080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044152995.1 → XP_044008930.1  lactosylceramide 4-alpha-galactosyltransferase-like isoform X1

    Related
    XP_044008930.1, XM_044152995.1

  2. XM_044152996.1 → XP_044008931.1  lactosylceramide 4-alpha-galactosyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A834XUL6
    Related
    XP_044008931.1, XM_044152996.1
    Conserved Domains (2) summary
    pfam04572
    Location:238 → 360
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:100 → 210
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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