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RpL39 ribosomal protein L39 [ Aphidius gifuensis ]

Gene ID: 122850294, updated on 10-Oct-2024

Summary

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Gene symbol
RpL39
Gene description
ribosomal protein L39
See related
EnsemblRapid:LOC122850294
Gene type
protein coding
RefSeq status
MODEL
Organism
Aphidius gifuensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
Orthologs
fruit fly honey bee all
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Genomic context

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See RpL39 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
3
Annotation release Status Assembly LG Location
100 current ASM1490517v1 (GCF_014905175.1) LG1 NC_057788.1 (17788313..17788961, complement)

Linkage Group LG1 - NC_057788.1Genomic Context describing neighboring genes Neighboring gene pseudouridine-5'-phosphate glycosidase Neighboring gene uncharacterized LOC122850114 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene Transmembrane protein 131 Neighboring gene Nucleosome assembly protein 1 Neighboring gene uncharacterized LOC122850261

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057788.1 Chromosome LG1 Reference ASM1490517v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1490517v1 Primary Assembly

Genomic

  1. NC_057788.1 Reference ASM1490517v1 Primary Assembly

    Range
    17788313..17788961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044149456.1 → XP_044005391.1  60S ribosomal protein L39

    Related
    XP_044005391.1, XM_044149456.1
    Conserved Domains (1) summary
    COG2167
    Location:1 → 50
    RPL39; Ribosomal protein L39E [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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