U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

galnt3 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122839607, updated on 28-May-2024

Summary

Go to the top of the page Help
Gene symbol
galnt3
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
See related
EnsemblRapid:ENSGAFG00005009749
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See galnt3 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
12
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG11 NC_057878.1 (16653482..16662622, complement)

Linkage Group LG11 - NC_057878.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122839595 Neighboring gene cysteine-serine-rich nuclear protein 3 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene sodium channel, voltage-gated, type I-like, alpha Neighboring gene uncharacterized LOC122839865

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_057878.1 Chromosome LG11 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057878.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    16653482..16662622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044131343.1 → XP_043987278.1  polypeptide N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A315W6K4
    Related
    ENSGAFP00005027739.1, ENSGAFT00005028543.1
    Conserved Domains (2) summary
    cd02510
    Location:182 → 487
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:501 → 623
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.