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LOC122839083 torsin-1A-interacting protein 2-like [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122839083, updated on 28-May-2024

Summary

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Gene symbol
LOC122839083
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSGAFG00005026526
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
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Genomic context

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See LOC122839083 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
11
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG10 NC_057877.1 (12304843..12309567)

Linkage Group LG10 - NC_057877.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122838441 Neighboring gene torsin-1A-interacting protein 1-like Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057877.1 Chromosome LG10 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057877.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    12304843..12309567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044130360.1 → XP_043986295.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    PRK08581
    Location:22 → 207
    PRK08581; amidase domain-containing protein

  2. XM_044130366.1 → XP_043986301.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (1) summary
    PRK08581
    Location:9 → 189
    PRK08581; amidase domain-containing protein

  3. XM_044130371.1 → XP_043986306.1  torsin-1A-interacting protein 2-like isoform X9

    Conserved Domains (1) summary
    PRK08581
    Location:5 → 162
    PRK08581; amidase domain-containing protein

  4. XM_044130373.1 → XP_043986308.1  torsin-1A-interacting protein 2-like isoform X10

    Related
    ENSGAFP00005067618.1, ENSGAFT00005075628.1

  5. XM_044130375.1 → XP_043986310.1  torsin-1A-interacting protein 2-like isoform X11

  6. XM_044130368.1 → XP_043986303.1  torsin-1A-interacting protein 2-like isoform X7

  7. XM_044130369.1 → XP_043986304.1  torsin-1A-interacting protein 2-like isoform X8

    Related
    ENSGAFP00005067619.1, ENSGAFT00005075629.1

  8. XM_044130370.1 → XP_043986305.1  torsin-1A-interacting protein 2-like isoform X9

    Conserved Domains (1) summary
    PRK08581
    Location:5 → 162
    PRK08581; amidase domain-containing protein

  9. XM_044130372.1 → XP_043986307.1  torsin-1A-interacting protein 2-like isoform X10

  10. XM_044130374.1 → XP_043986309.1  torsin-1A-interacting protein 2-like isoform X11

    Related
    ENSGAFP00005067620.1, ENSGAFT00005075630.1

  11. XM_044130362.1 → XP_043986297.1  torsin-1A-interacting protein 2-like isoform X3

    Conserved Domains (1) summary
    PRK08581
    Location:22 → 200
    PRK08581; amidase domain-containing protein

  12. XM_044130359.1 → XP_043986294.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    PRK08581
    Location:22 → 207
    PRK08581; amidase domain-containing protein

  13. XM_044130363.1 → XP_043986298.1  torsin-1A-interacting protein 2-like isoform X4

    Conserved Domains (1) summary
    PRK08581
    Location:22 → 196
    PRK08581; amidase domain-containing protein

  14. XM_044130361.1 → XP_043986296.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    PRK08581
    Location:22 → 203
    PRK08581; amidase domain-containing protein

  15. XM_044130364.1 → XP_043986299.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (1) summary
    PRK08581
    Location:9 → 189
    PRK08581; amidase domain-containing protein

  16. XM_044130367.1 → XP_043986302.1  torsin-1A-interacting protein 2-like isoform X6

    Conserved Domains (1) summary
    PRK08581
    Location:9 → 185
    PRK08581; amidase domain-containing protein
Nucleotide Protein
Heading Accession and Version

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