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p3h2 prolyl 3-hydroxylase 2 [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122838659, updated on 28-May-2024

Summary

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Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
See related
EnsemblRapid:ENSGAFG00005022576
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
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Genomic context

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See p3h2 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
15
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG10 NC_057877.1 (15562357..15610148, complement)

Linkage Group LG10 - NC_057877.1Genomic Context describing neighboring genes Neighboring gene oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial-like Neighboring gene coiled-coil domain containing 181 Neighboring gene claudin-19-like Neighboring gene coiled-coil domain containing 50a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057877.1 Chromosome LG10 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057877.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    15562357..15610148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044129458.1 → XP_043985393.1  prolyl 3-hydroxylase 2

    Related
    ENSGAFP00005060397.1, ENSGAFT00005065592.1
    Conserved Domains (1) summary
    smart00702
    Location:446 → 644
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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