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LOC122836832 C-terminal binding protein 1 [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122836832, updated on 28-May-2024

Summary

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Gene symbol
LOC122836832
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSGAFG00005010667
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
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Genomic context

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See LOC122836832 in Genome Data Viewer
Location:
chromosome: LG09
Exon count:
12
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG09 NC_057876.1 (29286858..29301706)

Linkage Group LG09 - NC_057876.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC122836841 Neighboring gene uncharacterized LOC122836840 Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene spondin 2b, extracellular matrix protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057876.1 Chromosome LG09 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057876.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    29286858..29301706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044126739.1 → XP_043982674.1  C-terminal-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_044126740.1 → XP_043982675.1  C-terminal-binding protein 1 isoform X2

    Related
    ENSGAFP00005030055.1, ENSGAFT00005031082.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_044126741.1 → XP_043982676.1  C-terminal-binding protein 1 isoform X3

    Related
    ENSGAFP00005030052.1, ENSGAFT00005031078.1
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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