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mgat4c mgat4 family member C [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122835165, updated on 28-May-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
See related
EnsemblRapid:ENSGAFG00005004016
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: LG08
Exon count:
7
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG08 NC_057875.1 (26716638..26851216, complement)

Linkage Group LG08 - NC_057875.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 9 Neighboring gene neurotensin Neighboring gene uncharacterized LOC122835168 Neighboring gene uncharacterized LOC122835167

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057875.1 Chromosome LG08 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057875.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    26716638..26851216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044123984.1 → XP_043979919.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

  2. XM_044123986.1 → XP_043979921.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  3. XM_044123985.1 → XP_043979920.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    Related
    ENSGAFP00005010603.1, ENSGAFT00005011027.1

  4. XM_044123983.1 → XP_043979918.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

    Related
    ENSGAFP00005010604.1, ENSGAFT00005011028.1

  5. XM_044123987.1 → XP_043979922.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  6. XM_044123988.1 → XP_043979923.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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