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crk v-crk avian sarcoma virus CT10 oncogene homolog [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122832221, updated on 28-May-2024

Summary

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Gene symbol
crk
Gene description
v-crk avian sarcoma virus CT10 oncogene homolog
See related
EnsemblRapid:ENSGAFG00005011800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
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Genomic context

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See crk in Genome Data Viewer
Location:
chromosome: LG06
Exon count:
3
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG06 NC_057873.1 (10770587..10784250, complement)

Linkage Group LG06 - NC_057873.1Genomic Context describing neighboring genes Neighboring gene unconventional myosin-Ic-like Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 Neighboring gene leucine rich repeat containing 75A Neighboring gene polymerase (DNA-directed), delta interacting protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057873.1 Chromosome LG06 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adapter molecule crk

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057873.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    10770587..10784250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044118775.1 → XP_043974710.1  adapter molecule crk

    UniProtKB/TrEMBL
    A0A315VAB3
    Related
    ENSGAFP00005032958.1, ENSGAFT00005034407.1
    Conserved Domains (4) summary
    cd09926
    Location:5 → 113
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:131 → 185
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cd11759
    Location:239 → 295
    SH3_CRK_C; C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cl22974
    Location:185 → 278
    HpaP; Type III secretion protein (HpaP)
Nucleotide Protein
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