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alg10 ALG10 alpha-1,2-mannosyltransferase [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122826449, updated on 28-May-2024

Summary

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Gene symbol
alg10
Gene description
ALG10 alpha-1,2-mannosyltransferase
See related
EnsemblRapid:ENSGAFG00005014163
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
zebrafish all
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Genomic context

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See alg10 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
3
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG23 NC_057890.1 (5554628..5559988, complement)

Linkage Group LG23 - NC_057890.1Genomic Context describing neighboring genes Neighboring gene copine-8 Neighboring gene uncharacterized LOC122826668 Neighboring gene Tp53rk binding protein Neighboring gene serine racemase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057890.1 Chromosome LG23 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057890.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    5554628..5559988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044108303.1 → XP_043964238.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase

    UniProtKB/TrEMBL
    A0A315USN4
    Related
    ENSGAFP00005039921.1, ENSGAFT00005041814.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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