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LOC122822269 rho GDP-dissociation inhibitor 1-like [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122822269, updated on 28-May-2024

Summary

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Gene symbol
LOC122822269
Gene description
rho GDP-dissociation inhibitor 1-like
See related
EnsemblRapid:ENSGAFG00005016732
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
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Genomic context

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See LOC122822269 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
6
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG19 NC_057886.1 (7717813..7739481, complement)

Linkage Group LG19 - NC_057886.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 17 Neighboring gene RNA pseudouridine synthase domain containing 1 Neighboring gene chloride channel 7 Neighboring gene solute carrier family 2 member 6 Neighboring gene LITAF domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057886.1 Chromosome LG19 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Rho GDP-dissociation inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GDP-dissociation inhibitor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057886.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    7717813..7739481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044100782.1 → XP_043956717.1  rho GDP-dissociation inhibitor 1-like

    UniProtKB/TrEMBL
    A0A315WBR2
    Related
    ENSGAFP00005047456.1, ENSGAFT00005049650.1
Nucleotide Protein
Heading Accession and Version

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