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gal3st3 galactose-3-O-sulfotransferase 3 [ Gambusia affinis (western mosquitofish) ]

Gene ID: 122820141, updated on 28-May-2024

Summary

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Gene symbol
gal3st3
Gene description
galactose-3-O-sulfotransferase 3
See related
EnsemblRapid:ENSGAFG00005025356
Gene type
protein coding
RefSeq status
MODEL
Organism
Gambusia affinis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia
Orthologs
human zebrafish all
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Genomic context

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See gal3st3 in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
4
Annotation release Status Assembly LG Location
100 current SWU_Gaff_1.0 (GCF_019740435.1) LG18 NC_057885.1 (9659974..9691596)

Linkage Group LG18 - NC_057885.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 14b Neighboring gene copper chaperone for superoxide dismutase-like Neighboring gene uncharacterized LOC122820142 Neighboring gene Ras and Rab interactor 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057885.1 Chromosome LG18 Reference SWU_Gaff_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gambusia affinis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SWU_Gaff_1.0 Primary Assembly

Genomic

  1. NC_057885.1 Reference SWU_Gaff_1.0 Primary Assembly

    Range
    9659974..9691596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044097326.1 → XP_043953261.1  galactose-3-O-sulfotransferase 3

    UniProtKB/TrEMBL
    A0A315W060
    Related
    ENSGAFP00005065315.1, ENSGAFT00005072571.1
    Conserved Domains (1) summary
    cl22970
    Location:18 → 409
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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