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PLEKHJ1 pleckstrin homology domain containing J1 [ Protopterus annectens (West African lungfish) ]

Gene ID: 122817699, updated on 22-Mar-2024

Summary

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Gene symbol
PLEKHJ1
Gene description
pleckstrin homology domain containing J1
Gene type
protein coding
RefSeq status
MODEL
Organism
Protopterus annectens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus
Orthologs
human mouse all
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Genomic context

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See PLEKHJ1 in Genome Data Viewer
Location:
chromosome: 13.part0
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PAN1.0 (GCF_019279795.1) 13.part0 NC_056747.1 (198153263..198479994, complement)

Chromosome 13.part0 - NC_056747.1Genomic Context describing neighboring genes Neighboring gene deoxyhypusine hydroxylase Neighboring gene histone-lysine N-methyltransferase, H3 lysine-79 specific-like Neighboring gene splicing factor 3A subunit 2-like Neighboring gene octapeptide-repeat protein T2-like Neighboring gene splicing factor 3A subunit 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056747.1 Chromosome 13.part0 Reference PAN1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salamander-like tail regeneration in the West African lungfish. Verissimo KM, et al. Proc Biol Sci, 2020 Sep 30. PMID 32933441, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family J member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protopterus annectens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAN1.0 Primary Assembly

Genomic

  1. NC_056747.1 Reference PAN1.0 Primary Assembly

    Range
    198153263..198479994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044090767.1 → XP_043946702.1  pleckstrin homology domain-containing family J member 1

    Conserved Domains (1) summary
    cd13258
    Location:97 → 210
    PH_PLEKHJ1; Pleckstrin homology domain containing, family J member 1 Pleckstrin homology (PH) domain
Nucleotide Protein
Heading Accession and Version

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