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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference PAN1.0 Primary Assembly
Genomic
-
NC_056741.1 Reference PAN1.0 Primary Assembly
- Range
-
743852525..744801168 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_044080201.1 → XP_043936136.1 thrombospondin-3 isoform X1
- Conserved Domains (9) summary
-
- cd00054
Location:324 → 358
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- sd00001
Location:536 → 558
- TSP3; TSP3 repeat_short [structural motif]
- sd00002
Location:559 → 594
- TSP3; TSP3 repeat_long [structural motif]
- sd00003
Location:465 → 499
- TSP3_1C; TSP3 repeat_1C [structural motif]
- cd16076
Location:238 → 277
- TSPcc; coiled coil [structural motif]
- pfam02412
Location:559 → 594
- TSP_3; Thrombospondin type 3 repeat
- NF000535
Location:470 → 660
- MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
- cl13107
Location:235 → 277
- TSPcc; Coiled coil region of thrombospondin
- cl22861
Location:29 → 201
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
-
XM_044080202.1 → XP_043936137.1 thrombospondin-3 isoform X2
- Conserved Domains (9) summary
-
- cd00054
Location:324 → 358
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- sd00001
Location:536 → 558
- TSP3; TSP3 repeat_short [structural motif]
- sd00002
Location:559 → 594
- TSP3; TSP3 repeat_long [structural motif]
- sd00003
Location:465 → 499
- TSP3_1C; TSP3 repeat_1C [structural motif]
- cd16076
Location:238 → 277
- TSPcc; coiled coil [structural motif]
- pfam02412
Location:559 → 594
- TSP_3; Thrombospondin type 3 repeat
- NF000535
Location:470 → 660
- MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
- cl13107
Location:235 → 277
- TSPcc; Coiled coil region of thrombospondin
- cl22861
Location:29 → 201
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...