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c1galt1a core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1a [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122786564, updated on 12-Sep-2024

Summary

Gene symbol
c1galt1a
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1a
Locus tag
JOB18_025641
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Also known as
si:dkey-202e17.1
Orthologs
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Genomic context

See c1galt1a in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
8
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG20 NC_058039.1 (14445594..14453186, complement)

Linkage Group LG20 - NC_058039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122786256 Neighboring gene collagen, type XXVIII, alpha 1a Neighboring gene succinate dehydrogenase complex assembly factor 3 Neighboring gene tachykinin precursor 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_058039.1 Chromosome LG20 Reference IFAPA_SoseM_1 Primary Assembly

General protein information

Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058039.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    14445594..14453186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044052950.1XP_043908885.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:93233
    Galactosyl_T; Galactosyltransferase
  2. XM_044052952.1XP_043908887.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:87227
    Galactosyl_T; Galactosyltransferase
  3. XM_044052953.1XP_043908888.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl21608
    Location:143227
    Galactosyl_T; Galactosyltransferase