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LOC122786422 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122786422, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122786422
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Locus tag
JOB18_041032
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122786422 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
16
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG20 NC_058039.1 (3314421..3386589, complement)

Linkage Group LG20 - NC_058039.1Genomic Context describing neighboring genes Neighboring gene oxysterol-binding protein-related protein 10-like Neighboring gene oxysterol-binding protein-related protein 10-like Neighboring gene TGF-beta receptor type-2-like Neighboring gene RNA-binding motif, single-stranded-interacting protein 3-like Neighboring gene uncharacterized LOC122786397

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058039.1 Chromosome LG20 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058039.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    3314421..3386589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044052711.1 → XP_043908646.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    Conserved Domains (1) summary
    COG1287
    Location:53 → 755
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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