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st3gal1l2 ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 2 [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122786116, updated on 22-Mar-2024

Summary

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Gene symbol
st3gal1l2
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 2
Locus tag
JOB18_023275
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
zebrafish all
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Genomic context

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See st3gal1l2 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
6
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG20 NC_058039.1 (19360539..19379431, complement)

Linkage Group LG20 - NC_058039.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specific factor 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene KH domain containing, RNA binding, signal transduction associated 3 Neighboring gene uncharacterized LOC122786443

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058039.1 Chromosome LG20 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1
Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058039.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    19360539..19379431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044052155.1 → XP_043908090.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases