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LOC122785122 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122785122, updated on 30-Nov-2023

Summary

Gene symbol
LOC122785122
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Locus tag
JOB18_025372
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

See LOC122785122 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
13
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG19 NC_058038.1 (18834617..18842117)

Linkage Group LG19 - NC_058038.1Genomic Context describing neighboring genes Neighboring gene nuclear protein 1b Neighboring gene NAD-dependent protein deacetylase HST1-like Neighboring gene uncharacterized LOC122785128 Neighboring gene uncharacterized LOC122785127 Neighboring gene uncharacterized LOC122785126 Neighboring gene UTP18 small subunit processome component

Genomic regions, transcripts, and products

Genomic Sequence:
NC_058038.1 Chromosome LG19 Reference IFAPA_SoseM_1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058038.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    18834617..18842117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044050759.1XP_043906694.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:68338
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
  2. XM_044050758.1XP_043906693.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:68338
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
  3. XM_044050760.1XP_043906695.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:49319
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
  4. XM_044050761.1XP_043906696.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:33303
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold