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gyg2 glycogenin 2 [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122784734, updated on 12-Sep-2024

Summary

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Gene symbol
gyg2
Gene description
glycogenin 2
Locus tag
JOB18_010016
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See gyg2 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
9
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (30622960..30632438, complement)

Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene protein kinase X-linked Neighboring gene matrix-remodelling associated 5a Neighboring gene uncharacterized LOC122784770 Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like Neighboring gene CD99 molecule Neighboring gene SLX9 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2
Names
glycogenin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    30622960..30632438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044050067.1 → XP_043906002.1  glycogenin-2 isoform X2

    Conserved Domains (1) summary
    cd02537
    Location:4 → 246
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_044050059.1 → XP_043905994.1  glycogenin-2 isoform X1

    Conserved Domains (1) summary
    cd02537
    Location:5 → 247
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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