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LOC122784705 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122784705, updated on 22-Mar-2024

Summary

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Gene symbol
LOC122784705
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Locus tag
JOB18_024255
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See LOC122784705 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
18
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG19 NC_058038.1 (14922314..14977715, complement)

Linkage Group LG19 - NC_058038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122785807 Neighboring gene neuronal pentraxin 1 like Neighboring gene SEC14-like protein 1 Neighboring gene uncharacterized LOC122785537 Neighboring gene rasd family member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058038.1 Chromosome LG19 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058038.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    14922314..14977715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044050019.1 → XP_043905954.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases