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si:dkey-219c10.4 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122784070, updated on 22-Mar-2024

Summary

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Gene symbol
si:dkey-219c10.4
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Locus tag
JOB18_044432
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
zebrafish all
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Genomic context

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See si:dkey-219c10.4 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
14
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (25100588..25114018)

Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67 Neighboring gene small nucleolar RNA ACA64 Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene immunoglobulin G-binding protein H-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
high affinity cGMP-specific 3 3'

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    25100588..25114018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044049153.1 → XP_043905088.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    Conserved Domains (1) summary
    cd00077
    Location:251 → 424
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif

  2. XM_044049157.1 → XP_043905092.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    Conserved Domains (1) summary
    cd00077
    Location:247 → 420
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
Nucleotide Protein
Heading Accession and Version

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