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LOC122782462 polypeptide N-acetylgalactosaminyltransferase 17-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122782462, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122782462
Gene description
polypeptide N-acetylgalactosaminyltransferase 17-like
Locus tag
JOB18_047482
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122782462 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
11
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG1 NC_058021.1 (38564016..38579207, complement)

Linkage Group LG1 - NC_058021.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2, subunit 3 gamma Neighboring gene kelch-like family member 15 Neighboring gene uncharacterized LOC122768309 Neighboring gene apolipoprotein O, b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058021.1 Chromosome LG1 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17-like
Names
polypeptide N-acetylgalactosaminyltransferase 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058021.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    38564016..38579207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044046803.1 → XP_043902738.1  polypeptide N-acetylgalactosaminyltransferase 17-like

    Conserved Domains (2) summary
    cd02510
    Location:161 → 460
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:473 → 598
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
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