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LOC122775969 glucoside xylosyltransferase 1-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122775969, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122775969
Gene description
glucoside xylosyltransferase 1-like
Locus tag
JOB18_000584
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122775969 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
8
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG10 NC_058030.1 (11939479..11946642, complement)

Linkage Group LG10 - NC_058030.1Genomic Context describing neighboring genes Neighboring gene contactin-1a-like Neighboring gene uncharacterized LOC122775968 Neighboring gene PDZ domain-containing RING finger protein 4-like Neighboring gene YY1-associated factor 2-like Neighboring gene periphilin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058030.1 Chromosome LG10 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058030.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    11939479..11946642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044036238.1 → XP_043892173.1  glucoside xylosyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cd06430
    Location:121 → 423
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  2. XM_044036239.1 → XP_043892174.1  glucoside xylosyltransferase 1-like isoform X2

    Conserved Domains (1) summary
    cd06430
    Location:90 → 392
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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