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LOC122775888 chitin synthase chs-2-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122775888, updated on 26-Jun-2024

Summary

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Gene symbol
LOC122775888
Gene description
chitin synthase chs-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC122775888 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
16
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG10 NC_058030.1 (22856343..22866001, complement)

Linkage Group LG10 - NC_058030.1Genomic Context describing neighboring genes Neighboring gene adrenomedullin 2b Neighboring gene chitin synthase-like Neighboring gene uncharacterized LOC122775996 Neighboring gene uncharacterized LOC122775889

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058030.1 Chromosome LG10 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058030.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    22856343..22866001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044036096.1 → XP_043892031.1  chitin synthase chs-2-like

    Conserved Domains (2) summary
    pfam03142
    Location:110 → 447
    Chitin_synth_2; Chitin synthase
    cl11394
    Location:50 → 267
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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