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LOC122774288 beta-1,4-galactosyltransferase 1-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122774288, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122774288
Gene description
beta-1,4-galactosyltransferase 1-like
Locus tag
JOB18_000459
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122774288 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
2
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG1 NC_058021.1 (24020181..24023852, complement)

Linkage Group LG1 - NC_058021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122774294 Neighboring gene myotubularin related protein 6 Neighboring gene APC membrane recruitment protein 2 Neighboring gene zinc finger homeobox 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058021.1 Chromosome LG1 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058021.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    24020181..24023852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044033421.1 → XP_043889356.1  beta-1,4-galactosyltransferase 1-like

    Conserved Domains (1) summary
    cd00899
    Location:133 → 350
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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