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pigv phosphatidylinositol glycan anchor biosynthesis, class V [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122774267, updated on 22-Mar-2024

Summary

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Gene symbol
pigv
Gene description
phosphatidylinositol glycan anchor biosynthesis, class V
Locus tag
JOB18_013742
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See pigv in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
3
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG9 NC_058029.1 (10164980..10168417, complement)

Linkage Group LG9 - NC_058029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122774757 Neighboring gene zinc finger DHHC-type palmitoyltransferase 18a Neighboring gene AT-rich interaction domain 1Aa Neighboring gene GPN-loop GTPase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058029.1 Chromosome LG9 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC18-A
Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058029.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    10164980..10168417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044033383.1 → XP_043889318.1  palmitoyltransferase ZDHHC18-A

    Conserved Domains (1) summary
    cl21590
    Location:3 → 505
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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