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kirrel3b kirre like nephrin family adhesion molecule 3b [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122773387, updated on 22-Mar-2024

Summary

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Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
Locus tag
JOB18_013130
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
zebrafish all
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Genomic context

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See kirrel3b in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
18
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG8 NC_058028.1 (19210753..19359020, complement)

Linkage Group LG8 - NC_058028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122773567 Neighboring gene uncharacterized LOC122773055 Neighboring gene somatolactin alpha Neighboring gene v-ets avian erythroblastosis virus E26 oncogene homolog 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058028.1 Chromosome LG8 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058028.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    19210753..19359020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044032042.1 → XP_043887977.1  kin of IRRE-like protein 3 isoform X10

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  2. XM_044032041.1 → XP_043887976.1  kin of IRRE-like protein 3 isoform X9

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  3. XM_044032040.1 → XP_043887975.1  kin of IRRE-like protein 3 isoform X8

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  4. XM_044032036.1 → XP_043887971.1  kin of IRRE-like protein 3 isoform X5

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  5. XM_044032035.1 → XP_043887970.1  kin of IRRE-like protein 3 isoform X4

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  6. XM_044032039.1 → XP_043887974.1  kin of IRRE-like protein 3 isoform X7

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  7. XM_044032038.1 → XP_043887973.1  kin of IRRE-like protein 3 isoform X6

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  8. XM_044032033.1 → XP_043887968.1  kin of IRRE-like protein 3 isoform X2

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  9. XM_044032034.1 → XP_043887969.1  kin of IRRE-like protein 3 isoform X3

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  10. XM_044032032.1 → XP_043887967.1  kin of IRRE-like protein 3 isoform X1

    Conserved Domains (3) summary
    smart00408
    Location:133 → 203
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:311 → 386
    IG; Immunoglobulin
    cd05758
    Location:388 → 485
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
Nucleotide Protein
Heading Accession and Version

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