U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122771443 beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122771443, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122771443
Gene description
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
Locus tag
JOB18_012219
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122771443 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
8
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG6 NC_058026.1 (20456249..20467630, complement)

Linkage Group LG6 - NC_058026.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing E Neighboring gene tweety family member 3b Neighboring gene galanin receptor 2a-like Neighboring gene mitotic arrest deficient 1 like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058026.1 Chromosome LG6 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058026.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    20456249..20467630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044029018.1 → XP_043884953.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like

    Conserved Domains (1) summary
    pfam02434
    Location:89 → 336
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases