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mgat3b beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122771095, updated on 22-Mar-2024

Summary

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Gene symbol
mgat3b
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b
Locus tag
JOB18_038638
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See mgat3b in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
7
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG6 NC_058026.1 (7010391..7082891)

Linkage Group LG6 - NC_058026.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin-1-like Neighboring gene TGF-beta activated kinase 1/MAP3K7 binding protein 1 Neighboring gene C1q and TNF related 6b Neighboring gene transmembrane protease serine 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058026.1 Chromosome LG6 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058026.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    7010391..7082891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044028437.1 → XP_043884372.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

  2. XM_044028440.1 → XP_043884375.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X3

  3. XM_044028436.1 → XP_043884371.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

  4. XM_044028439.1 → XP_043884374.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases