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LOC122769239 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122769239, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122769239
Gene description
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like
Locus tag
JOB18_030081
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122769239 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
1
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG5 NC_058025.1 (220288..221220)

Linkage Group LG5 - NC_058025.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM35-like Neighboring gene small nuclear ribonucleoprotein 200 (U5) Neighboring gene cytosolic iron-sulfur assembly component 1 Neighboring gene solute carrier family 25 member 25a Neighboring gene palmitoyltransferase ZDHHC12-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058025.1 Chromosome LG5 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like
Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058025.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    220288..221220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044025622.1 → XP_043881557.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

    Conserved Domains (1) summary
    cd00218
    Location:40 → 270
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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