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gal3st1a galactose-3-O-sulfotransferase 1a [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122769065, updated on 22-Mar-2024

Summary

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Gene symbol
gal3st1a
Gene description
galactose-3-O-sulfotransferase 1a
Locus tag
JOB18_017805
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See gal3st1a in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
4
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG5 NC_058025.1 (7740253..7747072, complement)

Linkage Group LG5 - NC_058025.1Genomic Context describing neighboring genes Neighboring gene apoptosis-inducing factor 3 Neighboring gene claudin 26 Neighboring gene leucine zipper like post translational regulator 1 Neighboring gene pescadillo Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058025.1 Chromosome LG5 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058025.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    7740253..7747072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044025341.1 → XP_043881276.1  galactosylceramide sulfotransferase

    Conserved Domains (1) summary
    cl22970
    Location:8 → 409
    Sulfotransfer_2; Sulfotransferase family

  2. XM_044025340.1 → XP_043881275.1  galactosylceramide sulfotransferase

    Conserved Domains (1) summary
    cl22970
    Location:8 → 409
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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