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LOC122767628 protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122767628, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122767628
Gene description
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
Locus tag
JOB18_049700
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122767628 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
2
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG4 NC_058024.1 (15656649..15666023)

Linkage Group LG4 - NC_058024.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type T Neighboring gene SNF related kinase a Neighboring gene R-spondin 4 Neighboring gene chromodomain helicase DNA binding protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058024.1 Chromosome LG4 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
Names
O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058024.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    15656649..15666023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044023029.1 → XP_043878964.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    Conserved Domains (2) summary
    cd00063
    Location:515 → 602
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15705
    Location:288 → 388
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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