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gxylt1b glucoside xylosyltransferase 1b [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122766264, updated on 22-Mar-2024

Summary

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Gene symbol
gxylt1b
Gene description
glucoside xylosyltransferase 1b
Locus tag
JOB18_005421
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
zebrafish all
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Genomic context

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See gxylt1b in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
7
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG3 NC_058023.1 (27695634..27707906, complement)

Linkage Group LG3 - NC_058023.1Genomic Context describing neighboring genes Neighboring gene contactin 1b Neighboring gene PDZ domain containing ring finger 4 Neighboring gene YY1 associated factor 2 Neighboring gene zinc finger CCHC-type and RNA binding motif 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058023.1 Chromosome LG3 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1
Names
glucoside xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058023.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    27695634..27707906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044020978.1 → XP_043876913.1  glucoside xylosyltransferase 1

    Conserved Domains (1) summary
    cd06430
    Location:92 → 394
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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