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mmadhca metabolism of cobalamin associated Da [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122762396, updated on 22-Mar-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
Locus tag
JOB18_019238
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
10
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (36141414..36151109)

Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene R3H domain-containing protein 1-like Neighboring gene Rho family GTPase 3a Neighboring gene rho GTPase-activating protein 20-like Neighboring gene paraspeckle component 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da
Names
methylmalonic aciduria and homocystinuria type D-like, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    36141414..36151109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044017578.1 → XP_043873513.1  metabolism of cobalamin associated Da isoform X1

  2. XM_044017601.1 → XP_043873536.1  metabolism of cobalamin associated Da isoform X2

  3. XM_044017586.1 → XP_043873521.1  metabolism of cobalamin associated Da isoform X2

  4. XM_044017593.1 → XP_043873528.1  metabolism of cobalamin associated Da isoform X2

Nucleotide Protein
Heading Accession and Version

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