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LOC122760582 carbohydrate sulfotransferase 12-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122760582, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122760582
Gene description
carbohydrate sulfotransferase 12-like
Locus tag
JOB18_023480
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122760582 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) Unplaced Scaffold NW_025320889.1 (128525..132476, complement)

NW_025320889.1Genomic Context describing neighboring genes Neighboring gene taxilin gamma Neighboring gene coiled-coil domain containing 102A Neighboring gene docking protein 4 Neighboring gene NAD synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025320889 Unplaced Scaffold Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NW_025320889.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    128525..132476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044015695.1 → XP_043871630.1  carbohydrate sulfotransferase 12-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases