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galnt11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122758784, updated on 22-Mar-2024

Summary

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Gene symbol
galnt11
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
Locus tag
JOB18_041124
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See galnt11 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
14
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG1 NC_058021.1 (35871243..35877646)

Linkage Group LG1 - NC_058021.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase 2C-like Neighboring gene histone-lysine N-methyltransferase 2D-like Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 2 Neighboring gene chondrolectin Neighboring gene zinc finger protein 184-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058021.1 Chromosome LG1 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058021.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    35871243..35877646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044013371.1 → XP_043869306.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:133 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:462 → 583
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_044013453.1 → XP_043869388.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X2

    Conserved Domains (1) summary
    cd02510
    Location:133 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

  3. XM_044013217.1 → XP_043869152.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:133 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:462 → 583
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  4. XM_044013131.1 → XP_043869066.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:133 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:462 → 583
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  5. XM_044013294.1 → XP_043869229.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:133 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:462 → 583
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
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