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Scgdelta sarcoglycan delta [ Apis laboriosa (Himalayan honeybee) ]

Gene ID: 122720456, updated on 10-Oct-2024

Summary

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Gene symbol
Scgdelta
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis laboriosa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Orthologs
fruit fly honey bee all
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Genomic context

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See Scgdelta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM1406632v1 (GCF_014066325.1) Unplaced Scaffold NW_025221207.1 (791477..1020392, complement)

NW_025221207.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122720576 Neighboring gene protein Cep78 homolog Neighboring gene uncharacterized LOC122720458 Neighboring gene phosphodiesterase 8 Neighboring gene epoxide hydrolase 4-like Neighboring gene organic cation transporter protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025221207 Unplaced Scaffold Reference ASM1406632v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis laboriosa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1406632v1 Primary Assembly

Genomic

  1. NW_025221207.1 Reference ASM1406632v1 Primary Assembly

    Range
    791477..1020392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043947198.1 → XP_043803133.1  zeta-sarcoglycan isoform X1

  2. XM_043947200.1 → XP_043803135.1  zeta-sarcoglycan isoform X2

  3. XM_043947199.1 → XP_043803134.1  zeta-sarcoglycan isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases