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Hcf Host cell factor [ Apis laboriosa (Himalayan honeybee) ]

Gene ID: 122720435, updated on 10-Oct-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis laboriosa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Orthologs
fruit fly honey bee all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM1406632v1 (GCF_014066325.1) Unplaced Scaffold NW_025221207.1 (278384..285545, complement)

NW_025221207.1Genomic Context describing neighboring genes Neighboring gene Synapse-associated protein 47kD Neighboring gene Death-associated inhibitor of apoptosis 1 Neighboring gene coatomer subunit alpha Neighboring gene Cysteine rich with EGF like domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025221207 Unplaced Scaffold Reference ASM1406632v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis laboriosa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1406632v1 Primary Assembly

Genomic

  1. NW_025221207.1 Reference ASM1406632v1 Primary Assembly

    Range
    278384..285545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043947165.1 → XP_043803100.1  host cell factor 1 isoform X1

    Conserved Domains (4) summary
    PLN02193
    Location:10 → 313
    PLN02193; nitrile-specifier protein
    COG5271
    Location:984 → 1283
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    sd00038
    Location:191 → 242
    Kelch; KELCH repeat [structural motif]
    pfam12526
    Location:429 → 486
    DUF3729; Protein of unknown function (DUF3729)

  2. XM_043947166.1 → XP_043803101.1  host cell factor 1 isoform X2

    Conserved Domains (4) summary
    PLN02193
    Location:10 → 313
    PLN02193; nitrile-specifier protein
    COG5271
    Location:982 → 1281
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    sd00038
    Location:191 → 242
    Kelch; KELCH repeat [structural motif]
    pfam12526
    Location:427 → 484
    DUF3729; Protein of unknown function (DUF3729)
Nucleotide Protein
Heading Accession and Version

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